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  1. A radio frequency (RF) reflectometry technique is presented to measure device capacitances using a probe station. This technique is used to characterize micro-electromechanical system (MEMS) variable capacitor devices that can be connected to create pull-up and pull-down networks used in digital gates for reversible computing. Adiabatic reversible computing is a promising approach to energy-efficient computing that can dramatically reduce heat dissipation by switching circuits at speeds below their RC time constants, introducing a trade-off between energy and speed. The variable capacitors in this study will be measured using single port RF reflectometry achieved with a custom-made RF probe. The RF probe consists of a micromanipulator with an on-board matching network and is calibrated by measuring a capacitive bank that shows a clearly visible frequency shift with the increase in capacitance. The RF probe worked well when measuring static capacitors with no parasitic resistance; however, the frequency shift is masked when measuring the MEMS variable capacitors due to their high in-series parasitic resistance (around 80 kΩ). Therefore, RF reflectometry has the potential to measure MEMS variable capacitors in the range of 0–30 fF when not masked by a high in-series parasitic resistance, creating a fast and versatile method for characterizing variable capacitors that can be used in energy-efficient computing.

     
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    Free, publicly-accessible full text available August 1, 2024
  2. Abstract Introduction

    Certain subpopulations in the United States are highly vulnerable to tobacco initiation and addiction, and elimination of disparities among those groups is crucial to reducing the burden of tobacco use.

    Aims and Methods

    This study evaluated the racial and ethnic differences in smoking initiation of menthol flavored cigarettes and cigars among never-users, and in subsequent tobacco use among new users of menthol-flavored products, using longitudinal data from waves 1–4 of the Population Assessment of Tobacco and Health Study. The outcomes of interest were new use of menthol-flavored products, and subsequent past 30-day and past 12-month cigarette and cigar smoking, irrespective of flavors, after initiation.

    Results

    The percentages of new users of menthol-flavored cigarettes and cigars at waves 2–4 were disproportionately higher in non-Hispanic black and Hispanic than in non-Hispanic white people. Adjusting for age and sex, black people who first used any menthol cigars had higher risk of past 30-day use of the same cigar category at the subsequent wave (adjusted risk ratio, aRR 1.48; 95% confidence interval [CI] 1.11 to 1.96) and past 12 months (aRR 1.74; 95% CI 1.55 to 2.63) compared to non-Hispanic white smokers. Black people who first used menthol-flavored cigarettes had marginally higher risk of subsequent past 30-day cigarette use (aRR 1.44; 95% CI 0.99 to 2.10) compared with their non-Hispanic white counterparts.

    Conclusions

    This study shows that racial and ethnic differences exist in both initiation of menthol-flavored tobacco products and product-specific subsequent use after first using menthol-flavored products; black and Hispanic people have higher rates of initiation; black people also have higher rates of subsequent use.

    Implications

    Use of menthol flavors in tobacco products is confirmed to be a contributor to large disparities in tobacco use; black and Hispanic people are more likely to maintain smoking through use of mentholated products than non-Hispanic white people. The findings suggest educational and regulatory actions on menthol-flavored tobacco products including restricting the selective marketing to vulnerable communities and banning characterizing flavors in cigarettes and cigars may reduce tobacco-related disparities and inform the Food And Drug Administration’s evidence-based rulemaking process.

     
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  3. G protein-coupled receptors (GPCRs) represent the largest group of membrane receptors for transmembrane signal transduction. Ligand-induced activation of GPCRs triggers G protein activation followed by various signaling cascades. Understanding the structural and energetic determinants of ligand binding to GPCRs and GPCRs to G proteins is crucial to the design of pharmacological treatments targeting specific conformations of these proteins to precisely control their signaling properties. In this study, we focused on interactions of a prototypical GPCR, beta-2 adrenergic receptor (β 2 AR), with its endogenous agonist, norepinephrine (NE), and the stimulatory G protein (G s ). Using molecular dynamics (MD) simulations, we demonstrated the stabilization of cationic NE, NE(+), binding to β 2 AR by G s protein recruitment, in line with experimental observations. We also captured the partial dissociation of the ligand from β 2 AR and the conformational interconversions of G s between closed and open conformations in the NE(+)–β 2 AR–G s ternary complex while it is still bound to the receptor. The variation of NE(+) binding poses was found to alter G s α subunit (G s α) conformational transitions. Our simulations showed that the interdomain movement and the stacking of G s α α1 and α5 helices are significant for increasing the distance between the G s α and β 2 AR, which may indicate a partial dissociation of G s α The distance increase commences when G s α is predominantly in an open state and can be triggered by the intracellular loop 3 (ICL3) of β 2 AR interacting with G s α, causing conformational changes of the α5 helix. Our results help explain molecular mechanisms of ligand and GPCR-mediated modulation of G protein activation. 
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  4. Abstract

    Genome‐wide association studies (GWAS) have led to rapid growth in detecting genetic variants associated with various phenotypes. Owing to a great number of publicly accessible GWAS summary statistics, and the difficulty in obtaining individual‐level genotype data, many existing gene‐based association tests have been adapted to require only GWAS summary statistics rather than individual‐level data. However, these association tests are restricted to unrelated individuals and thus do not apply to family samples directly. Moreover, due to its flexibility and effectiveness, the linear mixed model has been increasingly utilized in GWAS to handle correlated data, such as family samples. However, it remains unknown how to perform gene‐based association tests in family samples using the GWAS summary statistics estimated from the linear mixed model. In this study, we show that, when family size is negligible compared to the total sample size, the diagonal block structure of the kinship matrix makes it possible to approximate the correlation matrix of marginalZscores by linkage disequilibrium matrix. Based on this result, current methods utilizing summary statistics for unrelated individuals can be directly applied to family data without any modifications. Our simulation results demonstrate that this proposed strategy controls the type 1 error rate well in various situations. Finally, we exemplify the usefulness of the proposed approach with a dental caries GWAS data set.

     
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  5. The downward flux of sinking particles is a prominent Hg removal and redistribution process in the ocean; however, it is not well-constrained. Using data from three U.S. GEOTRACES cruises including the Pacific, Atlantic, and Arctic Oceans, we examined the mercury partitioning coefficient, K d , in the water column. The data suggest that the K d varies widely over three ocean basins. We also investigated the effect of particle concentration and composition on K d by comparing the concentration of small-sized (1–51 μm) suspended particulate mass (SPM) as well as its compositional fractions in six different phases to the partitioning coefficient. We observed an inverse relationship between K d and suspended particulate mass, as has been observed for other metals and known as the “particle concentration effect,” that explains much of the variation in K d . Particulate organic matter (POM) and calcium carbonate (CaCO 3 ) dominated the Hg partitioning in all three ocean basins while Fe and Mn could make a difference in some places where their concentrations are elevated, such as in hydrothermal plumes. Finally, our estimated Hg residence time has a strong negative correlation with average log bulk K d , indicating that K d has significant effect on Hg residence time. 
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  7. Abstract

    We compile full ocean‐depth size‐fractionated (1–51 and >51 μm) particle concentration and composition of suspended particulate matter from three recent U.S. GEOTRACES cruises, and exploit detailed information of particle characteristics measured to give insights into controls on sinking velocity and mass flux. Our model integrates the concept of fractal scaling into Stokes' Law by incorporating one of two porosity‐size power law relationships that result in fractal dimensions of 1.4 and 2.1. The medians of pump‐derived total (>1 μm) mass flux in the upper 100 m of gyre stations are 285.1, 609.2, and 99.3 mg/m2/d in the North Atlantic, Eastern Tropical South Pacific, and Western Arctic Ocean cruises, respectively. In this data set, variations in particle concentration were generally more important than sinking velocity in controlling variations in mass flux. We examine different terms in a Stokes' Law model to explore how variations in particle and water column characteristics from these three cruises affect mass flux. The decomposition of different aspects of the Stokes' relationship sheds light on the lowest total mass flux of the three cruises in the Western Arctic, which could be explained by the Arctic having the lowest particle concentrations as well as the lowest sinking velocities due to having the smallest particle sizes and the most viscous water. This work shows the importance of both particle characteristics and size distribution for mass fluxes, and similar methods can be applied to existing and future size‐fractionated filtered particulate measurements to improve our understanding of the biological pump elsewhere.

     
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  8. Abstract

    We present full water depth sections of size‐fractionated (1–51 μm; >51 μm) concentrations of suspended particulate matter and major particle phase composition (particulate organic matter [POM], including its carbon isotopic composition [POC‐δ13C] and C:N ratio, calcium carbonate [CaCO3], opal, lithogenic particles, and iron and manganese [oxyhydr]oxides) from the U.S. GEOTRACES Arctic Cruise (GN01) in the western Arctic in 2015. Whereas biogenic particles (POM and opal) dominate the upper 1,000 m, lithogenic particles are the most abundant particle type at depth. Minor phases such as manganese (Mn) oxides are higher in GN01 than in any other U.S. GEOTRACES cruises so far. Extremely depleted POC‐δ13C, as low as ~ −32‰, is ubiquitous at the surface of the western Arctic Ocean as a result of different growth rates of phytoplankton. Moderate penetration of depleted POC‐δ13C to depth indicates active sinking of large particles in the central basin. Lateral transport from the Chukchi shelf is also of significance in the western Arctic, as is evident from increases in biogenic silica to POC ratios and Mn oxide concentrations in the halocline, as well as lithogenic element contents in the deep waters. Our study supports previous suggestions of the near absence of CaCO3in the Arctic Basin. This study presents the first data set of concentration and composition of suspended particles in the western Arctic Ocean and sheds new light on the vertical and lateral processes that govern particle distribution in this enclosed ocean basin.

     
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